Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GXYLT1P1-201ENST00000446657 490 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AL096803.2-201ENST00000450032 677 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC104689.1-201ENST00000473356 768 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 RPL21P13-201ENST00000488305 481 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC021146.5-201ENST00000503544 545 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS1Q01581 HMGB3P15-201ENST00000507326 574 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 SLC25A15P5-201ENST00000508033 253 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 RN7SKP289-201ENST00000517244 295 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AP001207.2-201ENST00000519490 539 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 MTND1P36-201ENST00000522384 936 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 IGHV3-76-201ENST00000522465 295 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC006518.1-201ENST00000541449 943 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC093510.2-201ENST00000562820 896 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 MTND4LP25-201ENST00000570218 163 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC090616.5-202ENST00000582111 297 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AL365400.2-201ENST00000605604 902 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS1Q01581 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 ELL2P4-201ENST00000446870 1376 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AL672296.1-201ENST00000427780 2158 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS1Q01581 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 RNU6-805P-201ENST00000365643 106 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 OR6K3-202ENST00000368146 996 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS1Q01581 BTBD10P2-201ENST00000404779 676 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 EI24P1-201ENST00000416584 867 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 FO393414.1-201ENST00000428697 1184 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 FABP5P3-201ENST00000437960 408 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AL096829.2-201ENST00000446582 742 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 PRDX3P3-201ENST00000447765 522 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC125238.1-201ENST00000448842 249 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS1Q01581 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 HIGD1AP3-201ENST00000515857 278 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AL442163.2-201ENST00000553912 710 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AL389895.1-201ENST00000554127 252 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC011468.4-201ENST00000603942 409 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC092574.1-201ENST00000609771 420 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC012314.7-201ENST00000619693 93 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 AC092628.2-201ENST00000622492 339 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS1Q01581 XPOTP1-201ENST00000443317 2398 ntBASIC3.12□□□□□ -1.91
HMGCS1Q01581 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.12□□□□□ -1.91
HMGCS1Q01581 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGCS1Q01581 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS1Q01581 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC016716.1-201ENST00000265882 708 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 RNU6-1339P-201ENST00000363574 91 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 SNORA7.2-201ENST00000364446 145 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 OR52E6-202ENST00000379946 954 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 SNORD65C-201ENST00000390962 71 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 RPL22P22-201ENST00000395439 379 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 EI24P2-201ENST00000397776 1076 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 RPL31P2-201ENST00000413849 377 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCS1Q01581 AC244098.2-201ENST00000422068 99 ntBASIC3.11□□□□□ -1.91
HMGCS1Q01581 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms