Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.46□□□□□ -1.7
CLRN1P58418 RN7SL244P-201ENST00000493405 297 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 RNU6-1220P-201ENST00000517126 108 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 IGLV2-28-201ENST00000520681 304 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC022616.3-201ENST00000523940 148 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC012339.2-201ENST00000523996 453 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.46□□□□□ -1.7
CLRN1P58418 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 AC092490.3-201ENST00000545370 572 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 RAB11AP2-201ENST00000545905 639 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC068993.1-201ENST00000546724 589 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 CBX3P5-201ENST00000552017 521 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC060771.1-201ENST00000582031 164 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.46□□□□□ -1.7
CLRN1P58418 AC011477.5-201ENST00000586571 259 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 UBE2V2P2-201ENST00000587677 504 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 AL356055.1-201ENST00000602528 446 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 NRBF2P5-201ENST00000603087 788 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC105254.2-201ENST00000603636 436 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AL035413.2-201ENST00000604801 525 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AL136363.1-201ENST00000605349 337 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC008966.2-201ENST00000606157 453 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AC037198.3-201ENST00000616754 526 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 MIR6729-201ENST00000618194 65 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 AP003122.6-201ENST00000623831 495 ntBASIC4.46□□□□□ -1.7
CLRN1P58418 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.46□□□□□ -1.7
CLRN1P58418 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CLRN1P58418 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLRN1P58418 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
CLRN1P58418 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLRN1P58418 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.46□□□□□ -1.7
CLRN1P58418 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.46□□□□□ -1.7
CLRN1P58418 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLRN1P58418 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.45□□□□□ -1.7
CLRN1P58418 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 RPL23P2-201ENST00000320371 421 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLRN1P58418 Y_RNA.61-201ENST00000362835 102 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 SNORA51.1-201ENST00000363243 140 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RNA5SP455-201ENST00000365190 119 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RNU6-169P-201ENST00000365336 107 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RNU6-171P-201ENST00000384354 107 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RNU6-1009P-201ENST00000390996 107 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 Z97832.1-201ENST00000402490 328 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RPS15AP12-201ENST00000419498 388 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AL358176.3-201ENST00000420757 454 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 GTF2IP20-201ENST00000431663 360 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLRN1P58418 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 AC108734.1-201ENST00000439549 399 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.45□□□□□ -1.7
CLRN1P58418 RPS29P9-201ENST00000440360 171 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.45□□□□□ -1.7
CLRN1P58418 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.45□□□□□ -1.7
CLRN1P58418 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 FDX1P2-201ENST00000450769 375 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 IGHV5-78-201ENST00000450948 295 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.45□□□□□ -1.7
CLRN1P58418 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.45□□□□□ -1.7
CLRN1P58418 MTND1P11-201ENST00000456661 876 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AMD1P1-201ENST00000457220 922 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RPL23AP41-201ENST00000484754 458 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RPL36AP51-201ENST00000487216 318 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC055855.1-201ENST00000489563 579 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC073073.1-201ENST00000493920 463 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.45□□□□□ -1.7
CLRN1P58418 HMGN1P12-201ENST00000499125 195 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 AC114786.4-201ENST00000508771 728 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 COX6B1P5-201ENST00000509843 249 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 RNA5SP228-201ENST00000516232 133 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.45□□□□□ -1.7
CLRN1P58418 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.45□□□□□ -1.7
CLRN1P58418 HIF1AP1-201ENST00000553642 175 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC093591.2-201ENST00000565254 3843 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC034105.3-201ENST00000565294 442 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 MIR3146-201ENST00000580367 79 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC011447.4-201ENST00000587562 111 ntBASIC4.45□□□□□ -1.7
CLRN1P58418 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.45□□□□□ -1.7
CLRN1P58418 AL009028.1-201ENST00000604895 802 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms