Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC103987.1-201ENST00000473394 348 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC092902.1-201ENST00000486999 259 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 FCF1P8-201ENST00000510322 597 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC010265.1-201ENST00000513509 211 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 HMGN1P15-201ENST00000513870 295 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC006518.2-201ENST00000542513 940 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.27□□□□□ -1.89
PKNOX1P55347 OR4G1P-201ENST00000588632 938 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC024941.1-201ENST00000612250 334 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AC105227.2-201ENST00000615075 605 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AL356321.1-201ENST00000621360 228 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 CR383658.2-201ENST00000547576 1525 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX1P55347 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX1P55347 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX1P55347 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX1P55347 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX1P55347 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AL359837.1-201ENST00000381357 287 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PKNOX1P55347 SNORA48.8-201ENST00000391324 134 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AC092638.1-201ENST00000411966 1275 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 CRYBB2P1-203ENST00000415709 538 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 MTND2P16-201ENST00000419987 799 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC114973.1-201ENST00000429057 632 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.26□□□□□ -1.89
PKNOX1P55347 RPL7P59-201ENST00000447700 943 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.26□□□□□ -1.89
PKNOX1P55347 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AC015908.1-201ENST00000478739 476 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 ACTR3P3-201ENST00000480448 893 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC011352.3-201ENST00000505162 593 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 NAMPTP2-201ENST00000505629 1115 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AC119751.1-201ENST00000513357 765 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 RN7SKP13-201ENST00000515933 244 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 RNU1-95P-201ENST00000516357 160 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 RNU1-128P-201ENST00000516704 160 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 IGKV2D-36-201ENST00000518643 226 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.26□□□□□ -1.89
PKNOX1P55347 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.26□□□□□ -1.89
PKNOX1P55347 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.26□□□□□ -1.89
PKNOX1P55347 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX1P55347 AC092451.2-201ENST00000538746 658 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AC015917.1-201ENST00000579654 510 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC005412.1-201ENST00000580812 1049 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC022069.1-201ENST00000582910 658 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.26□□□□□ -1.89
PKNOX1P55347 MTATP6P2-201ENST00000603319 678 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
PKNOX1P55347 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.26□□□□□ -1.89
PKNOX1P55347 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.26□□□□□ -1.89
PKNOX1P55347 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PKNOX1P55347 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX1P55347 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX1P55347 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC007256.1-201ENST00000392253 2765 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PKNOX1P55347 RNU5B-1-201ENST00000363286 116 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 RNA5SP197-201ENST00000363357 119 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 RNU6-335P-201ENST00000364563 113 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 SNORA51.2-201ENST00000364595 132 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 OR6K3-202ENST00000368146 996 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 RNU6-921P-201ENST00000384361 107 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX1P55347 AP000567.1-201ENST00000406413 156 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.25□□□□□ -1.89
PKNOX1P55347 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PKNOX1P55347 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.25□□□□□ -1.89
PKNOX1P55347 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC006960.1-201ENST00000419980 153 ntBASIC3.25□□□□□ -1.89
PKNOX1P55347 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.25□□□□□ -1.89
PKNOX1P55347 AC233981.1-201ENST00000423224 461 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms