Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCN3P51790 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLCN3P51790 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLCN3P51790 TAF9BP1-201ENST00000396646 746 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 RPL7P60-201ENST00000397636 735 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 RPS15AP40-201ENST00000419621 391 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCN3P51790 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCN3P51790 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCN3P51790 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 RPL31P54-201ENST00000429803 370 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCN3P51790 AC091286.1-201ENST00000431233 461 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CLCN3P51790 KCTD9P3-201ENST00000434597 1169 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 MTND4P32-201ENST00000437189 1237 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCN3P51790 RPL23AP16-201ENST00000441715 421 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 NECAP1P2-201ENST00000455668 727 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 TPTE2P5-203ENST00000458118 728 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCN3P51790 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCN3P51790 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCN3P51790 RPS3AP22-201ENST00000488297 769 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 AC025445.1-201ENST00000502728 300 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 RAC1P2-201ENST00000511164 579 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 MRPS33P3-201ENST00000513456 322 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 RNA5SP208-201ENST00000516156 78 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC026403.1-201ENST00000518938 295 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCN3P51790 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCN3P51790 AC125611.1-201ENST00000549563 229 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCN3P51790 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCN3P51790 AC110760.3-201ENST00000598794 467 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AL358072.1-201ENST00000604156 575 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AL022161.1-201ENST00000604390 213 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC018638.7-201ENST00000605836 1114 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC113194.1-201ENST00000606037 500 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 SNORA51-201ENST00000606420 132 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC009090.3-201ENST00000616553 565 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 MIR6075-201ENST00000620782 95 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC079684.1-201ENST00000621405 437 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AL034408.1-202ENST00000636088 415 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCN3P51790 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCN3P51790 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.2□□□□□ -1.74
CLCN3P51790 AC087190.4-201ENST00000574616 8334 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLCN3P51790 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCN3P51790 AC005539.1-201ENST00000443768 1479 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 Z73965.1-201ENST00000623412 2297 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 MTND4P26-201ENST00000415971 1359 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCN3P51790 Y_RNA.311-201ENST00000365068 96 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 RHOT1P2-201ENST00000366423 333 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 RNU6-157P-201ENST00000383957 107 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 SKINT1L-201ENST00000401057 817 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCN3P51790 BTBD10P2-201ENST00000404779 676 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AL035423.1-201ENST00000420331 213 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.19□□□□□ -1.74
CLCN3P51790 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 MTND1P32-201ENST00000433043 938 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 MTND2P20-201ENST00000440805 661 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 HMGB3P9-201ENST00000441799 583 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 FGF7P5-201ENST00000441829 291 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCN3P51790 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 AC010301.1-201ENST00000473936 355 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCN3P51790 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCN3P51790 SNORA3.4-201ENST00000515969 96 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AC087373.1-201ENST00000524920 491 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 ZNF705CP-201ENST00000530515 889 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCN3P51790 PDCL2P2-201ENST00000533651 189 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 LSM6P2-201ENST00000552208 177 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AL389895.1-201ENST00000554127 252 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCN3P51790 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCN3P51790 AP005136.1-201ENST00000579765 429 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 SNORD39.3-201ENST00000584451 71 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AC146944.4-201ENST00000602697 718 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCN3P51790 AC128687.2-201ENST00000609657 566 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCN3P51790 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCN3P51790 AC120349.2-201ENST00000625002 298 ntBASIC4.19□□□□□ -1.74
CLCN3P51790 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms