Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 KPNA2P1-201ENST00000458289 1591 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.79□□□□□ -1.48
NFKB1P19838 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 AC007842.1-201ENST00000597336 2039 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 AC232271.1-201ENST00000602455 2715 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AC104964.3-201ENST00000606115 2860 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NFKB1P19838 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 AC114774.1-201ENST00000507410 1770 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 LINC02019-201ENST00000608605 2060 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NFKB1P19838 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NFKB1P19838 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 Y_RNA.80-201ENST00000362996 102 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RNU6-179P-201ENST00000363350 107 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RNU6-593P-201ENST00000364716 112 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RNU6-26P-201ENST00000383985 107 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 SNORA75B-201ENST00000384053 137 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 Y_RNA.455-201ENST00000384230 98 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RNY1P14-201ENST00000384426 108 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AC005042.1-201ENST00000393397 800 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 POLHP1-201ENST00000411806 470 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.78□□□□□ -1.48
NFKB1P19838 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.78□□□□□ -1.48
NFKB1P19838 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.78□□□□□ -1.48
NFKB1P19838 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.78□□□□□ -1.48
NFKB1P19838 HMGB3P24-201ENST00000433260 622 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.78□□□□□ -1.48
NFKB1P19838 HMGN1P2-201ENST00000445197 310 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RPL23AP43-201ENST00000446445 471 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AL031584.1-201ENST00000447169 754 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AP006222.1-205ENST00000450734 457 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RPL5P30-201ENST00000465511 891 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 PLGLA-201ENST00000465668 449 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RPS23P6-201ENST00000466136 431 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.78□□□□□ -1.48
NFKB1P19838 GAPDHP62-201ENST00000515313 990 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 RNU6-635P-201ENST00000516651 102 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 SNORA70.20-201ENST00000516848 126 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AC023442.1-201ENST00000531247 422 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.78□□□□□ -1.48
NFKB1P19838 AC068993.1-201ENST00000546724 589 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.78□□□□□ -1.48
NFKB1P19838 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.78□□□□□ -1.48
NFKB1P19838 AL365434.2-201ENST00000607979 234 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 AL592148.3-201ENST00000608771 2646 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 AC090607.5-201ENST00000615692 224 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NFKB1P19838 AP000843.1-201ENST00000624880 701 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 U6.114-201ENST00000636407 96 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 PWAR1-201ENST00000624188 2414 ntBASIC5.78□□□□□ -1.48
NFKB1P19838 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NFKB1P19838 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.78□□□□□ -1.48
NFKB1P19838 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 NXPH1-205ENST00000602349 1953 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 Y_RNA.153-201ENST00000363615 91 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 RNA5SP30-201ENST00000365552 115 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms