Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MTND5P26-201ENST00000426018 1752 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 RNU6-492P-201ENST00000363035 104 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 RN7SKP224-201ENST00000364140 325 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 MIR195-201ENST00000385194 87 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 MTND4LP20-201ENST00000402379 270 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 VN1R10P-201ENST00000447106 875 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AL034418.1-201ENST00000448675 860 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 RNA5SP103-201ENST00000459503 118 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 RN7SL817P-201ENST00000480777 288 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC108145.1-201ENST00000503770 153 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 SNX5P1-201ENST00000505757 1041 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 RN7SKP244-201ENST00000516513 307 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AP002748.2-201ENST00000528671 348 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 RPL21P7-201ENST00000557463 483 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC053481.4-201ENST00000583164 216 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 MIR7151-201ENST00000617477 60 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 AL008636.1-201ENST00000625038 1018 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 AC092162.3-201ENST00000624511 1624 ntBASIC4.92□□□□□ -1.62
HLA-DOAP06340 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DOAP06340 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DOAP06340 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DOAP06340 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC126323.6-202ENST00000568092 3511 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 RNU6-501P-201ENST00000364072 100 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 RN7SKP226-201ENST00000364912 300 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 RNU6-297P-201ENST00000384636 107 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AL359643.1-201ENST00000404109 423 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AL139098.1-201ENST00000407291 389 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 RPL36AP36-201ENST00000418616 301 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC073335.1-201ENST00000427776 363 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AL513175.1-201ENST00000431492 780 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AL121601.2-201ENST00000438019 707 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 DNAJC19P4-201ENST00000440115 345 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AL121769.1-201ENST00000469473 401 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 TMED11P-201ENST00000479478 690 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 VN1R105P-201ENST00000486595 910 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC108078.3-201ENST00000502633 489 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC109464.2-201ENST00000510242 943 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 KRT19P6-201ENST00000510983 209 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 FTH1P21-201ENST00000512179 511 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 RNU6-506P-201ENST00000516553 94 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 RNA5SP360-201ENST00000516555 118 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 RNU6-347P-201ENST00000516658 105 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC090970.3-201ENST00000612566 866 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC090517.2-201ENST00000614966 680 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC034229.5-201ENST00000624258 185 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC079228.1-201ENST00000624774 1049 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 MKKS-204ENST00000639674 192 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC107982.1-201ENST00000507171 1300 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DOAP06340 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DOAP06340 AC104118.1-201ENST00000607625 1589 ntBASIC4.91□□□□□ -1.62
HLA-DOAP06340 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
HLA-DOAP06340 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms