Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 MIR3065-201ENST00000390137 79 ntBASIC3.98□□□□□ -1.77
LDLRP01130 TAF9BP1-201ENST00000396646 746 ntBASIC3.98□□□□□ -1.77
LDLRP01130 CRYBB2P1-203ENST00000415709 538 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AL356095.1-201ENST00000417217 199 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 AC006960.1-201ENST00000419980 153 ntBASIC3.98□□□□□ -1.77
LDLRP01130 USP9YP26-201ENST00000421008 661 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 AC005345.1-201ENST00000431868 217 ntBASIC3.98□□□□□ -1.77
LDLRP01130 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 UBE2D3P1-201ENST00000436669 444 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AF228730.2-201ENST00000438784 848 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AL445567.1-201ENST00000439121 144 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 AC118469.1-201ENST00000442943 488 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 MTND2P4-201ENST00000445034 1004 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 EXTL2P1-201ENST00000446218 416 ntBASIC3.98□□□□□ -1.77
LDLRP01130 ELOCP30-201ENST00000447108 299 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 HMGN3P1-201ENST00000453847 193 ntBASIC3.98□□□□□ -1.77
LDLRP01130 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 RPL5P24-201ENST00000463742 885 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC091564.1-201ENST00000464563 479 ntBASIC3.98□□□□□ -1.77
LDLRP01130 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 AC012170.1-201ENST00000495139 359 ntBASIC3.98□□□□□ -1.77
LDLRP01130 SETP14-201ENST00000497538 873 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC021146.8-201ENST00000507455 733 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC090071.1-201ENST00000507713 644 ntBASIC3.98□□□□□ -1.77
LDLRP01130 RN7SKP31-201ENST00000516354 278 ntBASIC3.98□□□□□ -1.77
LDLRP01130 IGKV2-38-201ENST00000517443 247 ntBASIC3.98□□□□□ -1.77
LDLRP01130 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 OR5BC1P-201ENST00000529327 739 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AP000619.3-201ENST00000535634 1127 ntBASIC3.98□□□□□ -1.77
LDLRP01130 TRAV8-5-201ENST00000537369 341 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.98□□□□□ -1.77
LDLRP01130 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.98□□□□□ -1.77
LDLRP01130 AC074051.3-201ENST00000570238 358 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AL354943.1-201ENST00000572103 781 ntBASIC3.98□□□□□ -1.77
LDLRP01130 VN1R79P-201ENST00000593540 513 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC113403.1-201ENST00000604910 193 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC004492.1-201ENST00000607036 742 ntBASIC3.98□□□□□ -1.77
LDLRP01130 MIR6867-201ENST00000610636 67 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC005332.6-201ENST00000613178 446 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AL021997.2-201ENST00000615674 271 ntBASIC3.98□□□□□ -1.77
LDLRP01130 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 AC007546.1-201ENST00000619452 559 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC092184.1-201ENST00000625042 715 ntBASIC3.98□□□□□ -1.77
LDLRP01130 AC007671.2-201ENST00000637344 619 ntBASIC3.98□□□□□ -1.77
LDLRP01130 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.98□□□□□ -1.77
LDLRP01130 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LDLRP01130 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 AC027287.1-201ENST00000553115 1453 ntBASIC3.98□□□□□ -1.77
LDLRP01130 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LDLRP01130 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.97□□□□□ -1.77
LDLRP01130 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LDLRP01130 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LDLRP01130 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LDLRP01130 RNA5SP322-201ENST00000363617 119 ntBASIC3.97□□□□□ -1.77
LDLRP01130 Y_RNA.201-201ENST00000364052 96 ntBASIC3.97□□□□□ -1.77
LDLRP01130 RNA5SP175-201ENST00000364275 119 ntBASIC3.97□□□□□ -1.77
LDLRP01130 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.97□□□□□ -1.77
LDLRP01130 SUGT1P1-201ENST00000379514 476 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AC097374.1-203ENST00000400783 485 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AL121978.1-201ENST00000402778 359 ntBASIC3.97□□□□□ -1.77
LDLRP01130 MIR1179-201ENST00000408703 91 ntBASIC3.97□□□□□ -1.77
LDLRP01130 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.97□□□□□ -1.77
LDLRP01130 SNRPFP1-201ENST00000414761 252 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 MFSD13B-201ENST00000420133 1290 ntBASIC3.97□□□□□ -1.77
LDLRP01130 RPL7P53-201ENST00000421245 739 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 AL353706.1-201ENST00000436728 494 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 MTND3P1-201ENST00000441336 220 ntBASIC3.97□□□□□ -1.77
LDLRP01130 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.97□□□□□ -1.77
LDLRP01130 MTCO2P25-201ENST00000447065 681 ntBASIC3.97□□□□□ -1.77
LDLRP01130 RPL12P26-201ENST00000452430 487 ntBASIC3.97□□□□□ -1.77
LDLRP01130 USP9YP10-201ENST00000454868 628 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 375.6 ms