Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL109653.1-201ENST00000603091 248 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC006557.5-201ENST00000603126 811 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC103881.1-201ENST00000603476 538 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC113368.1-201ENST00000603736 382 ntBASIC3.3□□□□□ -1.88
LSM1O15116 RMST_10.1-201ENST00000616309 154 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC006963.1-201ENST00000624003 1052 ntBASIC3.3□□□□□ -1.88
LSM1O15116 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM1O15116 CR381572.1-201ENST00000625098 102 ntBASIC3.3□□□□□ -1.88
LSM1O15116 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM1O15116 AL392088.2-201ENST00000637607 285 ntBASIC3.3□□□□□ -1.88
LSM1O15116 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM1O15116 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM1O15116 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LSM1O15116 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
LSM1O15116 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM1O15116 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM1O15116 RPL7P26-201ENST00000333817 754 ntBASIC3.29□□□□□ -1.88
LSM1O15116 SNORA51.4-201ENST00000364993 124 ntBASIC3.29□□□□□ -1.88
LSM1O15116 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM1O15116 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM1O15116 RNU6-1181P-201ENST00000384191 106 ntBASIC3.29□□□□□ -1.88
LSM1O15116 RNU6-339P-201ENST00000384310 107 ntBASIC3.29□□□□□ -1.88
LSM1O15116 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
LSM1O15116 SSXP10-201ENST00000402595 565 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC093578.1-201ENST00000415219 368 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM1O15116 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM1O15116 AL356968.1-201ENST00000416622 474 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM1O15116 CYCSP4-201ENST00000429682 331 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC091390.1-201ENST00000433904 331 ntBASIC3.29□□□□□ -1.88
LSM1O15116 RRM2P4-201ENST00000441721 562 ntBASIC3.29□□□□□ -1.88
LSM1O15116 GAPDHP27-201ENST00000447427 1020 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC008264.1-201ENST00000447612 367 ntBASIC3.29□□□□□ -1.88
LSM1O15116 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM1O15116 AC097262.1-201ENST00000452559 548 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AL590639.1-201ENST00000456484 337 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC146507.2-201ENST00000460608 476 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.29□□□□□ -1.88
LSM1O15116 AL024509.2-201ENST00000493462 493 ntBASIC3.29□□□□□ -1.88
LSM1O15116 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM1O15116 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM1O15116 ARL4AP2-201ENST00000507378 601 ntBASIC3.29□□□□□ -1.88
LSM1O15116 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM1O15116 RNU6-416P-201ENST00000516265 103 ntBASIC3.29□□□□□ -1.88
LSM1O15116 IGJP1-201ENST00000522682 475 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC239860.2-201ENST00000525886 270 ntBASIC3.29□□□□□ -1.88
LSM1O15116 OR4A45P-201ENST00000529954 901 ntBASIC3.29□□□□□ -1.88
LSM1O15116 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LSM1O15116 AL157394.1-201ENST00000562983 1224 ntBASIC3.29□□□□□ -1.88
LSM1O15116 MIR3160-1-201ENST00000577972 85 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC010591.1-201ENST00000603941 649 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC005972.3-201ENST00000606304 481 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC131902.3-201ENST00000611767 581 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC068724.3-201ENST00000625906 87 ntBASIC3.29□□□□□ -1.88
LSM1O15116 AC068620.4-201ENST00000636730 1182 ntBASIC3.29□□□□□ -1.88
LSM1O15116 LRRC77P-213ENST00000637727 880 ntBASIC3.29□□□□□ -1.88
LSM1O15116 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM1O15116 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM1O15116 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM1O15116 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM1O15116 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM1O15116 U8.9-201ENST00000365667 134 ntBASIC3.28□□□□□ -1.88
LSM1O15116 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 RPL21P17-201ENST00000397467 475 ntBASIC3.28□□□□□ -1.88
LSM1O15116 AL121972.1-201ENST00000402023 252 ntBASIC3.28□□□□□ -1.88
LSM1O15116 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM1O15116 RPP40P1-201ENST00000426762 456 ntBASIC3.28□□□□□ -1.88
LSM1O15116 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
LSM1O15116 YWHAZP7-201ENST00000436906 631 ntBASIC3.28□□□□□ -1.88
LSM1O15116 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
LSM1O15116 AL929288.2-201ENST00000446368 407 ntBASIC3.28□□□□□ -1.88
LSM1O15116 AC103987.1-201ENST00000473394 348 ntBASIC3.28□□□□□ -1.88
LSM1O15116 RPL21P47-201ENST00000483696 477 ntBASIC3.28□□□□□ -1.88
LSM1O15116 PRELID3BP5-201ENST00000508612 460 ntBASIC3.28□□□□□ -1.88
LSM1O15116 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 RN7SKP13-201ENST00000515933 244 ntBASIC3.28□□□□□ -1.88
LSM1O15116 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.28□□□□□ -1.88
LSM1O15116 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.28□□□□□ -1.88
LSM1O15116 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM1O15116 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM1O15116 AC012182.1-201ENST00000570133 895 ntBASIC3.28□□□□□ -1.88
LSM1O15116 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM1O15116 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM1O15116 AL354976.1-201ENST00000613843 387 ntBASIC3.28□□□□□ -1.88
LSM1O15116 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM1O15116 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM1O15116 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM1O15116 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
LSM1O15116 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM1O15116 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LSM1O15116 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LSM1O15116 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
LSM1O15116 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LSM1O15116 AL161912.2-201ENST00000565707 3007 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms