Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NUP58P1-201ENST00000502546 1738 ntBASIC4.66□□□□□ -1.66
FOXN3O00409 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
FOXN3O00409 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
FOXN3O00409 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXN3O00409 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.65□□□□□ -1.66
FOXN3O00409 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
FOXN3O00409 OR5P1P-201ENST00000299512 925 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RNU6-28P-201ENST00000362378 107 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 U3.4-201ENST00000363352 213 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RNU4-24P-201ENST00000364565 139 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RNU6-339P-201ENST00000384310 107 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RNA5SP332-201ENST00000391063 115 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RPS3AP26-201ENST00000398259 784 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AL583835.1-201ENST00000399570 407 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AL355379.1-201ENST00000405542 640 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 Z99497.1-201ENST00000421282 135 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXN3O00409 AL590233.1-201ENST00000430017 456 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 PRELID3BP10-201ENST00000431957 584 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 MTCO3P5-201ENST00000433620 714 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AL512286.1-201ENST00000439244 400 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXN3O00409 AL360221.1-201ENST00000445989 335 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN3O00409 SNRPGP5-201ENST00000456003 220 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RPS20P24-201ENST00000457473 361 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RPS26P28-201ENST00000470806 348 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RPL31P50-201ENST00000471002 296 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AC023424.2-201ENST00000493479 777 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AK3P4-201ENST00000504283 583 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXN3O00409 AC024589.1-201ENST00000512207 263 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AF131216.2-201ENST00000512316 564 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 RPL12P22-201ENST00000519073 490 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN3O00409 OR4P1P-201ENST00000530808 1136 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN3O00409 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.65□□□□□ -1.67
FOXN3O00409 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
FOXN3O00409 MTND6P33-201ENST00000571794 183 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AL121834.1-201ENST00000572284 509 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AC053481.3-201ENST00000577881 843 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXN3O00409 AL354984.3-201ENST00000604803 325 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 U73479.1-201ENST00000618062 168 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 AC040168.1-201ENST00000623594 991 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXN3O00409 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
FOXN3O00409 PABPC1P7-201ENST00000413177 1513 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.65□□□□□ -1.67
FOXN3O00409 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.65□□□□□ -1.67
FOXN3O00409 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN3O00409 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXN3O00409 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
FOXN3O00409 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXN3O00409 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN3O00409 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN3O00409 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
FOXN3O00409 Y_RNA.77-201ENST00000362962 107 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 Y_RNA.201-201ENST00000364052 96 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 RNA5SP175-201ENST00000364275 119 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 RNU4-75P-201ENST00000364621 146 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 RNU6-730P-201ENST00000383954 104 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 Y_RNA.505-201ENST00000384489 102 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 MIR585-201ENST00000384887 94 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 RPS3AP23-201ENST00000401762 784 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 SNORA11F-201ENST00000408237 128 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC119751.6-201ENST00000416712 186 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXN3O00409 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXN3O00409 AL365184.2-201ENST00000431139 435 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 MUPP-201ENST00000438111 566 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AL590399.6-201ENST00000446396 307 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 MTCO1P27-201ENST00000448269 226 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 RPL29P29-201ENST00000448725 423 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 TPT1P13-201ENST00000449760 499 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 AL121877.1-201ENST00000453704 622 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 HMGB1P15-201ENST00000453854 435 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC109486.1-201ENST00000486833 374 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC093809.1-201ENST00000509155 340 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 PPBPP1-201ENST00000510807 373 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 PTGES3P3-201ENST00000511479 482 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC034159.1-201ENST00000513885 583 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC116347.2-201ENST00000514912 523 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN3O00409 AC092851.1-201ENST00000535964 478 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.64□□□□□ -1.67
FOXN3O00409 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN3O00409 AC008507.1-201ENST00000587506 734 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXN3O00409 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms