Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 FRG1CP-201ENST00000358464 769 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU6-707P-201ENST00000364647 95 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 RNA5SP267-201ENST00000364893 126 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 SNORD116-23-201ENST00000384645 92 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 Y_RNA.578-201ENST00000390903 88 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 PTP4A1P5-201ENST00000420305 455 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 SDCBPP2-201ENST00000424643 885 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL031313.1-201ENST00000448435 256 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 COX6CP18-201ENST00000448769 222 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 U3.44-201ENST00000458938 192 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC087385.1-201ENST00000475062 312 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 RPL7P47-201ENST00000497299 556 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 SETP14-201ENST00000497538 873 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 NARSP2-201ENST00000518524 679 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 LRRC6P1-201ENST00000532188 885 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC074029.1-201ENST00000552531 1044 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL049838.1-201ENST00000563647 981 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 MTND1P8-201ENST00000571424 950 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 KLKP1-201ENST00000595979 403 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL445435.1-201ENST00000604232 665 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC027449.1-201ENST00000608890 407 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL138478.1-201ENST00000612252 832 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 PART1_2.1-201ENST00000612397 250 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL050303.3-201ENST00000613704 284 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC010975.3-201ENST00000618727 978 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL121895.2-201ENST00000619558 447 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 MFSD8-245ENST00000641743 948 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL049781.1-201ENST00000623195 3585 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC073346.2-201ENST00000624724 2058 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AL139811.1-201ENST00000424779 2299 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU1-33P-201ENST00000364249 162 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR491-201ENST00000384877 84 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 SNORD17-201ENST00000390930 237 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 DSTNP4-201ENST00000399472 474 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RN7SKP53-201ENST00000411337 315 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 HSFY4P-201ENST00000415994 1181 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AL158156.1-201ENST00000422509 473 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 HSFY1P1-201ENST00000423928 1178 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 Z93242.1-201ENST00000427102 353 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 IFNNP1-201ENST00000429219 553 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 USP9YP7-201ENST00000436723 430 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 USP9YP32-201ENST00000452432 430 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 NF1P3-201ENST00000457709 450 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RN7SL601P-201ENST00000471221 293 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RPL32P34-201ENST00000486380 400 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC079203.1-201ENST00000487972 404 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 BTF3L4P4-201ENST00000506381 449 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC048346.1-201ENST00000510247 144 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC005351.1-201ENST00000511152 786 ntBASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.61□□□□□ -1.83
NEDD8-MDP1E9PL57 RN7SKP82-201ENST00000516786 223 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms