Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm44430-201ENSMUST00000203376 995 ntBASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nr1h3Q9Z0Y9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Rps4l-201ENSMUST00000071745 943 ntBASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nr1h3Q9Z0Y9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.77■□□□□ 0.43
Nr1h3Q9Z0Y9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Nr1h3Q9Z0Y9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Nr1h3Q9Z0Y9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Gm44454-201ENSMUST00000198541 138 ntBASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.76■□□□□ 0.43
Nr1h3Q9Z0Y9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nr1h3Q9Z0Y9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nr1h3Q9Z0Y9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms