Protein–RNA interactions for Protein: Q9Z0E0

Ncdn, Neurochondrin, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcdnQ9Z0E0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Gm43438-201ENSMUST00000198133 379 ntBASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NcdnQ9Z0E0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
NcdnQ9Z0E0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NcdnQ9Z0E0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NcdnQ9Z0E0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
NcdnQ9Z0E0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Mir8112-201ENSMUST00000184382 131 ntBASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Fst-202ENSMUST00000223640 2612 ntBASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NcdnQ9Z0E0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Mir8117-201ENSMUST00000184773 107 ntBASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NcdnQ9Z0E0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Gm7222-201ENSMUST00000117512 906 ntBASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NcdnQ9Z0E0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NcdnQ9Z0E0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms