Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nubp1Q9R060 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Gm11779-201ENSMUST00000118541 368 ntBASIC14.34□□□□□ -0.11
Nubp1Q9R060 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Mir5126-201ENSMUST00000175513 77 ntBASIC14.34□□□□□ -0.11
Nubp1Q9R060 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nubp1Q9R060 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp1Q9R060 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.33□□□□□ -0.11
Nubp1Q9R060 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp1Q9R060 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.33□□□□□ -0.11
Nubp1Q9R060 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp1Q9R060 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Nubp1Q9R060 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nubp1Q9R060 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.33□□□□□ -0.12
Nubp1Q9R060 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.33□□□□□ -0.12
Nubp1Q9R060 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Gm13186-201ENSMUST00000118031 316 ntBASIC14.33□□□□□ -0.12
Nubp1Q9R060 Gm12849-201ENSMUST00000120013 739 ntBASIC14.33□□□□□ -0.12
Nubp1Q9R060 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Psmb5-202ENSMUST00000227257 622 ntBASIC14.33□□□□□ -0.12
Nubp1Q9R060 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nubp1Q9R060 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.32□□□□□ -0.12
Nubp1Q9R060 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Gm15165-201ENSMUST00000118140 502 ntBASIC14.32□□□□□ -0.12
Nubp1Q9R060 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Gm43575-201ENSMUST00000196420 516 ntBASIC14.32□□□□□ -0.12
Nubp1Q9R060 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Gm44454-201ENSMUST00000198541 138 ntBASIC14.32□□□□□ -0.12
Nubp1Q9R060 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.32□□□□□ -0.12
Nubp1Q9R060 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nubp1Q9R060 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms