Protein–RNA interactions for Protein: Q9QY39

Pdzd4, PDZ domain-containing protein 4, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd4Q9QY39 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Gm11950-201ENSMUST00000121615 838 ntBASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Ank2-226ENSMUST00000189368 339 ntBASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pdzd4Q9QY39 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Gm11336-201ENSMUST00000118168 334 ntBASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdzd4Q9QY39 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdzd4Q9QY39 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzd4Q9QY39 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Pdzd4Q9QY39 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdzd4Q9QY39 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdzd4Q9QY39 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzd4Q9QY39 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzd4Q9QY39 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms