Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tubb3Q9ERD7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubb3Q9ERD7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Gm7370-201ENSMUST00000219471 767 ntBASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubb3Q9ERD7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Gm17661-201ENSMUST00000170317 270 ntBASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Gm21362-201ENSMUST00000194272 928 ntBASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Gm7367-201ENSMUST00000057611 492 ntBASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubb3Q9ERD7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubb3Q9ERD7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tubb3Q9ERD7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms