Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.2■□□□□ 0.66
Ccdc7Q9D541 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ccdc7Q9D541 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc7Q9D541 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc7Q9D541 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.17■□□□□ 0.66
Ccdc7Q9D541 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms