Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC8.81□□□□□ -1
Sec61bQ9CQS8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Gm13884-201ENSMUST00000118103 829 ntBASIC8.8□□□□□ -1
Sec61bQ9CQS8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Gm44450-201ENSMUST00000199528 114 ntBASIC8.8□□□□□ -1
Sec61bQ9CQS8 Gm44430-201ENSMUST00000203376 995 ntBASIC8.8□□□□□ -1
Sec61bQ9CQS8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC8.8□□□□□ -1
Sec61bQ9CQS8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Rps4l-201ENSMUST00000071745 943 ntBASIC8.8□□□□□ -1
Sec61bQ9CQS8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Zfp264-201ENSMUST00000208656 1563 ntBASIC8.8□□□□□ -1
Sec61bQ9CQS8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Sec61bQ9CQS8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC8.79□□□□□ -1
Sec61bQ9CQS8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC8.79□□□□□ -1
Sec61bQ9CQS8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms