Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.57■□□□□ 0.24
Lsm7Q9CQQ8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lsm7Q9CQQ8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm7Q9CQQ8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Gm15372-201ENSMUST00000120729 834 ntBASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm7Q9CQQ8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm7Q9CQQ8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.52■□□□□ 0.24
Lsm7Q9CQQ8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms