Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cntnap4Q99P47 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Mir8098-201ENSMUST00000184011 137 ntBASIC17.54■□□□□ 0.4
Cntnap4Q99P47 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntnap4Q99P47 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntnap4Q99P47 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cntnap4Q99P47 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cntnap4Q99P47 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Cntnap4Q99P47 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Cntnap4Q99P47 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cntnap4Q99P47 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cntnap4Q99P47 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Gm11594-201ENSMUST00000122313 162 ntBASIC17.51■□□□□ 0.39
Cntnap4Q99P47 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Rprl3-201ENSMUST00000157400 290 ntBASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntnap4Q99P47 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.5■□□□□ 0.39
Cntnap4Q99P47 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms