Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdha11Q91Y19 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Pcdha11Q91Y19 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Gm44430-201ENSMUST00000203376 995 ntBASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha11Q91Y19 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha11Q91Y19 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha11Q91Y19 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms