Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb20Q91XZ9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb20Q91XZ9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Ank2-226ENSMUST00000189368 339 ntBASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Gm36982-201ENSMUST00000193796 1128 ntBASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Gm10819-201ENSMUST00000099988 561 ntBASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb20Q91XZ9 Gm44863-201ENSMUST00000207613 1422 ntBASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb20Q91XZ9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Gm43553-201ENSMUST00000200900 685 ntBASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms