Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Mtag2-201ENSMUST00000058665 714 ntBASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb3Q91XZ7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb3Q91XZ7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Mir1199-201ENSMUST00000117015 119 ntBASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Mir6349-201ENSMUST00000184059 97 ntBASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb3Q91XZ7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Gm715-201ENSMUST00000117865 831 ntBASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Mir7071-201ENSMUST00000184847 69 ntBASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Asic1-205ENSMUST00000228185 1818 ntBASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb3Q91XZ7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb3Q91XZ7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms