Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TraipQ8VIG6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.41■□□□□ 0.38
TraipQ8VIG6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Mir6404-201ENSMUST00000183699 94 ntBASIC17.41■□□□□ 0.38
TraipQ8VIG6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.41■□□□□ 0.38
TraipQ8VIG6 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.41■□□□□ 0.38
TraipQ8VIG6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.41■□□□□ 0.38
TraipQ8VIG6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.41■□□□□ 0.38
TraipQ8VIG6 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.41■□□□□ 0.38
TraipQ8VIG6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TraipQ8VIG6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TraipQ8VIG6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Gm25745-201ENSMUST00000174945 133 ntBASIC17.4■□□□□ 0.38
TraipQ8VIG6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Gm9172-201ENSMUST00000212092 954 ntBASIC17.4■□□□□ 0.38
TraipQ8VIG6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TraipQ8VIG6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.39■□□□□ 0.38
TraipQ8VIG6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TraipQ8VIG6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm12497-201ENSMUST00000138778 237 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44357-201ENSMUST00000195897 142 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm19658-201ENSMUST00000196231 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44367-201ENSMUST00000196836 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44350-201ENSMUST00000197197 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44390-201ENSMUST00000197533 144 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44313-201ENSMUST00000198018 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44486-201ENSMUST00000198508 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44314-201ENSMUST00000199263 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44394-201ENSMUST00000199558 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44484-201ENSMUST00000199873 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44466-201ENSMUST00000200264 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm44359-201ENSMUST00000200671 138 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Gm6376-201ENSMUST00000209407 580 ntBASIC17.39■□□□□ 0.37
TraipQ8VIG6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TraipQ8VIG6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Gm11452-201ENSMUST00000122376 690 ntBASIC17.38■□□□□ 0.37
TraipQ8VIG6 Gm25406-201ENSMUST00000157599 105 ntBASIC17.38■□□□□ 0.37
TraipQ8VIG6 Gm18733-201ENSMUST00000173950 856 ntBASIC17.38■□□□□ 0.37
TraipQ8VIG6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.38■□□□□ 0.37
TraipQ8VIG6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.38■□□□□ 0.37
TraipQ8VIG6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms