Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Mir6349-201ENSMUST00000184059 97 ntBASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cgref1Q8R1U2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Gm11927-201ENSMUST00000118472 759 ntBASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cgref1Q8R1U2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Gm26524-201ENSMUST00000192339 390 ntBASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cgref1Q8R1U2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.72■□□□□ 0.27
Cgref1Q8R1U2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.71■□□□□ 0.27
Cgref1Q8R1U2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cgref1Q8R1U2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Cgref1Q8R1U2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cgref1Q8R1U2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cgref1Q8R1U2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cgref1Q8R1U2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms