Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim68Q8K243 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim68Q8K243 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim68Q8K243 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim68Q8K243 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Trim68Q8K243 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trim68Q8K243 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.77■□□□□ 0.44
Trim68Q8K243 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim68Q8K243 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim68Q8K243 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim68Q8K243 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim68Q8K243 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim68Q8K243 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim68Q8K243 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.77■□□□□ 0.43
Trim68Q8K243 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim68Q8K243 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim68Q8K243 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim68Q8K243 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim68Q8K243 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim68Q8K243 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Trim68Q8K243 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim68Q8K243 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim68Q8K243 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim68Q8K243 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.75■□□□□ 0.43
Trim68Q8K243 Gm11336-201ENSMUST00000118168 334 ntBASIC17.75■□□□□ 0.43
Trim68Q8K243 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim68Q8K243 Gm2651-201ENSMUST00000203560 838 ntBASIC17.75■□□□□ 0.43
Trim68Q8K243 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim68Q8K243 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim68Q8K243 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.74■□□□□ 0.43
Trim68Q8K243 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trim68Q8K243 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim68Q8K243 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim68Q8K243 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim68Q8K243 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim68Q8K243 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms