Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps50Q8CI71 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps50Q8CI71 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Mir5130-201ENSMUST00000175160 84 ntBASIC16.15■□□□□ 0.18
Vps50Q8CI71 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.15■□□□□ 0.18
Vps50Q8CI71 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps50Q8CI71 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Vps50Q8CI71 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Gm16061-201ENSMUST00000122167 857 ntBASIC16.14■□□□□ 0.17
Vps50Q8CI71 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.14■□□□□ 0.17
Vps50Q8CI71 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.14■□□□□ 0.17
Vps50Q8CI71 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.14■□□□□ 0.17
Vps50Q8CI71 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps50Q8CI71 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Gm13401-201ENSMUST00000117074 291 ntBASIC16.13■□□□□ 0.17
Vps50Q8CI71 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Vps50Q8CI71 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps50Q8CI71 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vps50Q8CI71 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms