Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rsph6aQ8CDR2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Gm18195-201ENSMUST00000207604 706 ntBASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rsph6aQ8CDR2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rsph6aQ8CDR2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Gm13323-201ENSMUST00000120245 1151 ntBASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Gm25406-201ENSMUST00000157599 105 ntBASIC21.29■■□□□ 1
Rsph6aQ8CDR2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rsph6aQ8CDR2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rsph6aQ8CDR2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Gm18733-201ENSMUST00000173950 856 ntBASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Mir6404-201ENSMUST00000183699 94 ntBASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rsph6aQ8CDR2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms