Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Alx1Q8C8B0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Alx1Q8C8B0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Gm12895-201ENSMUST00000122214 226 ntBASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Alx1Q8C8B0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Gm44454-201ENSMUST00000198541 138 ntBASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.11■□□□□ 0.65
Alx1Q8C8B0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Mir6404-201ENSMUST00000183699 94 ntBASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Alx1Q8C8B0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms