Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rft1Q8C3B8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rft1Q8C3B8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.68□□□□□ -0.06
Rft1Q8C3B8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rft1Q8C3B8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rft1Q8C3B8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rft1Q8C3B8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rft1Q8C3B8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rft1Q8C3B8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rft1Q8C3B8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Mir8112-201ENSMUST00000184382 131 ntBASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Gm4974-201ENSMUST00000209974 875 ntBASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Odf3b-204ENSMUST00000227834 930 ntBASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Gm5417-201ENSMUST00000079706 384 ntBASIC14.66□□□□□ -0.06
Rft1Q8C3B8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rft1Q8C3B8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Gm21814-202ENSMUST00000203277 873 ntBASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rft1Q8C3B8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms