Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sh3rf2Q8BZT2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.6■□□□□ 0.25
Sh3rf2Q8BZT2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sh3rf2Q8BZT2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3rf2Q8BZT2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3rf2Q8BZT2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sh3rf2Q8BZT2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Sh3rf2Q8BZT2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Sh3rf2Q8BZT2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Rps4l-201ENSMUST00000071745 943 ntBASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sh3rf2Q8BZT2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sh3rf2Q8BZT2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sh3rf2Q8BZT2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms