Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cphx2Q8BX39 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Cphx2Q8BX39 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cphx2Q8BX39 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cphx2Q8BX39 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.56□□□□□ -0.4
Cphx2Q8BX39 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cphx2Q8BX39 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cphx2Q8BX39 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cphx2Q8BX39 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Gm11927-201ENSMUST00000118472 759 ntBASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cphx2Q8BX39 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cphx2Q8BX39 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms