Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp43Q8BUM9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp43Q8BUM9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.62■□□□□ 0.25
Usp43Q8BUM9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp43Q8BUM9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp43Q8BUM9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp43Q8BUM9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms