Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Timm23-208ENSMUST00000226683 750 ntBASIC17.62■□□□□ 0.41
Nop53Q8BK35 Odf3b-204ENSMUST00000227834 930 ntBASIC17.62■□□□□ 0.41
Nop53Q8BK35 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nop53Q8BK35 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nop53Q8BK35 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.61■□□□□ 0.41
Nop53Q8BK35 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.61■□□□□ 0.41
Nop53Q8BK35 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nop53Q8BK35 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Gm5417-201ENSMUST00000079706 384 ntBASIC17.6■□□□□ 0.41
Nop53Q8BK35 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.6■□□□□ 0.41
Nop53Q8BK35 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.59■□□□□ 0.41
Nop53Q8BK35 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.59■□□□□ 0.41
Nop53Q8BK35 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nop53Q8BK35 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nop53Q8BK35 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop53Q8BK35 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nop53Q8BK35 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nop53Q8BK35 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop53Q8BK35 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nop53Q8BK35 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.58■□□□□ 0.4
Nop53Q8BK35 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.58■□□□□ 0.4
Nop53Q8BK35 Gm7791-201ENSMUST00000219066 539 ntBASIC17.58■□□□□ 0.4
Nop53Q8BK35 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nop53Q8BK35 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms