Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Samm50Q8BGH2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
Samm50Q8BGH2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Samm50Q8BGH2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Samm50Q8BGH2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Samm50Q8BGH2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Samm50Q8BGH2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Samm50Q8BGH2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.27■□□□□ 0.67
Samm50Q8BGH2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Samm50Q8BGH2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Gm13474-201ENSMUST00000122466 815 ntBASIC19.25■□□□□ 0.67
Samm50Q8BGH2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Samm50Q8BGH2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Samm50Q8BGH2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Samm50Q8BGH2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Samm50Q8BGH2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms