Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Skida1Q80YR3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Skida1Q80YR3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm16061-201ENSMUST00000122167 857 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm18871-201ENSMUST00000218655 745 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 Gm4803-201ENSMUST00000218729 1279 ntBASIC16.52■□□□□ 0.24
Skida1Q80YR3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Skida1Q80YR3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Skida1Q80YR3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.52■□□□□ 0.23
Skida1Q80YR3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm12788-201ENSMUST00000119090 308 ntBASIC16.51■□□□□ 0.23
Skida1Q80YR3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm42433-201ENSMUST00000196806 940 ntBASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm44681-201ENSMUST00000208447 842 ntBASIC16.51■□□□□ 0.23
Skida1Q80YR3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm21089-201ENSMUST00000215843 325 ntBASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.51■□□□□ 0.23
Skida1Q80YR3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Skida1Q80YR3 Golph3-205ENSMUST00000228671 2842 ntBASIC16.51■□□□□ 0.23
Skida1Q80YR3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC16.5■□□□□ 0.23
Skida1Q80YR3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC16.5■□□□□ 0.23
Skida1Q80YR3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Gm23776-201ENSMUST00000158993 325 ntBASIC16.5■□□□□ 0.23
Skida1Q80YR3 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Gm29036-201ENSMUST00000189967 877 ntBASIC16.5■□□□□ 0.23
Skida1Q80YR3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Gm44742-201ENSMUST00000207190 1412 ntBASIC16.5■□□□□ 0.23
Skida1Q80YR3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.5■□□□□ 0.23
Skida1Q80YR3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.5■□□□□ 0.23
Skida1Q80YR3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Skida1Q80YR3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Skida1Q80YR3 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Skida1Q80YR3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Skida1Q80YR3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Skida1Q80YR3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Skida1Q80YR3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Skida1Q80YR3 AC130831.1-201ENSMUST00000224546 1474 ntBASIC16.49■□□□□ 0.23
Skida1Q80YR3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Skida1Q80YR3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms