Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp38Q80UU2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Rpp38Q80UU2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.39■□□□□ 0.22
Rpp38Q80UU2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rpp38Q80UU2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rpp38Q80UU2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.39■□□□□ 0.21
Rpp38Q80UU2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp38Q80UU2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 AA414768-201ENSMUST00000121924 1257 ntBASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.38■□□□□ 0.21
Rpp38Q80UU2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Gm29518-201ENSMUST00000190858 372 ntBASIC16.37■□□□□ 0.21
Rpp38Q80UU2 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Rpp38Q80UU2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms