Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Actl10-202ENSMUST00000226583 1501 ntBASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Gm43575-201ENSMUST00000196420 516 ntBASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf38bQ80SY5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Gm10566-201ENSMUST00000086739 996 ntBASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prpf38bQ80SY5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Gm5264-201ENSMUST00000190584 848 ntBASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.1■□□□□ 0.33
Prpf38bQ80SY5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prpf38bQ80SY5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf38bQ80SY5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Prpf38bQ80SY5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prpf38bQ80SY5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prpf38bQ80SY5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms