Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tff3Q62395 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.21□□□□□ -0.13
Tff3Q62395 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tff3Q62395 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.21□□□□□ -0.13
Tff3Q62395 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.21□□□□□ -0.13
Tff3Q62395 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.21□□□□□ -0.13
Tff3Q62395 Gm27459-201ENSMUST00000184860 107 ntBASIC14.21□□□□□ -0.13
Tff3Q62395 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tff3Q62395 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tff3Q62395 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tff3Q62395 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tff3Q62395 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Tff3Q62395 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tff3Q62395 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tff3Q62395 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tff3Q62395 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.2□□□□□ -0.14
Tff3Q62395 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Tff3Q62395 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Gm12644-201ENSMUST00000119935 606 ntBASIC14.2□□□□□ -0.14
Tff3Q62395 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Rprl3-201ENSMUST00000157400 290 ntBASIC14.2□□□□□ -0.14
Tff3Q62395 Gm5864-201ENSMUST00000202263 970 ntBASIC14.2□□□□□ -0.14
Tff3Q62395 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.2□□□□□ -0.14
Tff3Q62395 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.2□□□□□ -0.14
Tff3Q62395 Mzt1-203ENSMUST00000227948 952 ntBASIC14.2□□□□□ -0.14
Tff3Q62395 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.2□□□□□ -0.14
Tff3Q62395 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tff3Q62395 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tff3Q62395 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Tff3Q62395 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tff3Q62395 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tff3Q62395 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tff3Q62395 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Tff3Q62395 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Gm13312-201ENSMUST00000119631 718 ntBASIC14.19□□□□□ -0.14
Tff3Q62395 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.19□□□□□ -0.14
Tff3Q62395 Gm27867-201ENSMUST00000184778 125 ntBASIC14.19□□□□□ -0.14
Tff3Q62395 Gm28659-201ENSMUST00000188013 759 ntBASIC14.19□□□□□ -0.14
Tff3Q62395 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Tff3Q62395 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tff3Q62395 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tff3Q62395 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Tff3Q62395 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.18□□□□□ -0.14
Tff3Q62395 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.18□□□□□ -0.14
Tff3Q62395 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.18□□□□□ -0.14
Tff3Q62395 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Mir8098-201ENSMUST00000184011 137 ntBASIC14.18□□□□□ -0.14
Tff3Q62395 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.18□□□□□ -0.14
Tff3Q62395 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.18□□□□□ -0.14
Tff3Q62395 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tff3Q62395 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms