Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.05□□□□□ -0.16
Sox19Q62249 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Sox19Q62249 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sox19Q62249 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sox19Q62249 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.05□□□□□ -0.16
Sox19Q62249 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.05□□□□□ -0.16
Sox19Q62249 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sox19Q62249 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.04□□□□□ -0.16
Sox19Q62249 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.04□□□□□ -0.16
Sox19Q62249 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.04□□□□□ -0.16
Sox19Q62249 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Sox19Q62249 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox19Q62249 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Sox19Q62249 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox19Q62249 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sox19Q62249 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.03□□□□□ -0.16
Sox19Q62249 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sox19Q62249 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sox19Q62249 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox19Q62249 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox19Q62249 Gm42545-201ENSMUST00000202755 922 ntBASIC14.03□□□□□ -0.16
Sox19Q62249 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox19Q62249 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox19Q62249 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Sox19Q62249 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox19Q62249 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.03□□□□□ -0.16
Sox19Q62249 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox19Q62249 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Sox19Q62249 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sox19Q62249 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox19Q62249 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox19Q62249 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.02□□□□□ -0.17
Sox19Q62249 Gm42569-201ENSMUST00000200539 472 ntBASIC14.02□□□□□ -0.17
Sox19Q62249 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms