Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.24■□□□□ 0.67
Scn9aQ62205 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scn9aQ62205 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.24■□□□□ 0.67
Scn9aQ62205 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn9aQ62205 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.23■□□□□ 0.67
Scn9aQ62205 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Gm27300-201ENSMUST00000184085 97 ntBASIC19.23■□□□□ 0.67
Scn9aQ62205 Gm27335-201ENSMUST00000184758 97 ntBASIC19.23■□□□□ 0.67
Scn9aQ62205 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Scn9aQ62205 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Gm13616-201ENSMUST00000120600 222 ntBASIC19.23■□□□□ 0.67
Scn9aQ62205 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.23■□□□□ 0.67
Scn9aQ62205 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scn9aQ62205 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.23■□□□□ 0.67
Scn9aQ62205 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.22■□□□□ 0.67
Scn9aQ62205 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scn9aQ62205 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Scn9aQ62205 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.22■□□□□ 0.67
Scn9aQ62205 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.21■□□□□ 0.67
Scn9aQ62205 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scn9aQ62205 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.21■□□□□ 0.67
Scn9aQ62205 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Scn9aQ62205 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scn9aQ62205 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.21■□□□□ 0.67
Scn9aQ62205 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn9aQ62205 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn9aQ62205 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn9aQ62205 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Scn9aQ62205 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Scn9aQ62205 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scn9aQ62205 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Scn9aQ62205 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Scn9aQ62205 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.2■□□□□ 0.66
Scn9aQ62205 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scn9aQ62205 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.19■□□□□ 0.66
Scn9aQ62205 Gm27494-201ENSMUST00000184735 189 ntBASIC19.19■□□□□ 0.66
Scn9aQ62205 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 Gm17968-201ENSMUST00000194902 784 ntBASIC19.19■□□□□ 0.66
Scn9aQ62205 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.19■□□□□ 0.66
Scn9aQ62205 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Scn9aQ62205 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scn9aQ62205 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Scn9aQ62205 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Scn9aQ62205 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.18■□□□□ 0.66
Scn9aQ62205 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Scn9aQ62205 Mir6404-201ENSMUST00000183699 94 ntBASIC19.18■□□□□ 0.66
Scn9aQ62205 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scn9aQ62205 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms