Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Foxc2Q61850 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Foxc2Q61850 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Gm13474-201ENSMUST00000122466 815 ntBASIC12.99□□□□□ -0.33
Foxc2Q61850 Gm18958-201ENSMUST00000174258 762 ntBASIC12.99□□□□□ -0.33
Foxc2Q61850 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Foxc2Q61850 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Foxc2Q61850 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Foxc2Q61850 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.98□□□□□ -0.33
Foxc2Q61850 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Foxc2Q61850 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Foxc2Q61850 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxc2Q61850 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
Foxc2Q61850 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.98□□□□□ -0.33
Foxc2Q61850 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Foxc2Q61850 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.98□□□□□ -0.33
Foxc2Q61850 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.98□□□□□ -0.33
Foxc2Q61850 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.98□□□□□ -0.33
Foxc2Q61850 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Foxc2Q61850 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxc2Q61850 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxc2Q61850 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.97□□□□□ -0.33
Foxc2Q61850 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Foxc2Q61850 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Foxc2Q61850 Rubie-203ENSMUST00000227803 2430 ntBASIC12.97□□□□□ -0.33
Foxc2Q61850 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Foxc2Q61850 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxc2Q61850 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxc2Q61850 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxc2Q61850 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxc2Q61850 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.96□□□□□ -0.33
Foxc2Q61850 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxc2Q61850 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Foxc2Q61850 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Foxc2Q61850 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms