Protein–RNA interactions for Protein: Q61644

Pacsin1, Protein kinase C and casein kinase substrate in neurons protein 1, mousemouse

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacsin1Q61644 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pacsin1Q61644 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.64■□□□□ 0.41
Pacsin1Q61644 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pacsin1Q61644 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pacsin1Q61644 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pacsin1Q61644 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pacsin1Q61644 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.63■□□□□ 0.41
Pacsin1Q61644 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.63■□□□□ 0.41
Pacsin1Q61644 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.63■□□□□ 0.41
Pacsin1Q61644 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pacsin1Q61644 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Gm13836-201ENSMUST00000121159 501 ntBASIC17.61■□□□□ 0.41
Pacsin1Q61644 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pacsin1Q61644 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.6■□□□□ 0.41
Pacsin1Q61644 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.6■□□□□ 0.41
Pacsin1Q61644 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pacsin1Q61644 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pacsin1Q61644 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pacsin1Q61644 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pacsin1Q61644 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms