Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.57■□□□□ 0.24
Six4Q61321 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Six4Q61321 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Six4Q61321 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Six4Q61321 Gm15794-201ENSMUST00000120182 631 ntBASIC16.57■□□□□ 0.24
Six4Q61321 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Six4Q61321 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Six4Q61321 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Six4Q61321 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Six4Q61321 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Six4Q61321 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Six4Q61321 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.56■□□□□ 0.24
Six4Q61321 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.56■□□□□ 0.24
Six4Q61321 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.56■□□□□ 0.24
Six4Q61321 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Six4Q61321 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Six4Q61321 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Six4Q61321 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Six4Q61321 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.55■□□□□ 0.24
Six4Q61321 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.55■□□□□ 0.24
Six4Q61321 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.55■□□□□ 0.24
Six4Q61321 Gm45328-201ENSMUST00000210942 917 ntBASIC16.55■□□□□ 0.24
Six4Q61321 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Six4Q61321 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Six4Q61321 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Six4Q61321 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Six4Q61321 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Six4Q61321 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Six4Q61321 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Six4Q61321 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Gm7284-201ENSMUST00000131667 944 ntBASIC16.54■□□□□ 0.24
Six4Q61321 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Gm10052-201ENSMUST00000168019 960 ntBASIC16.54■□□□□ 0.24
Six4Q61321 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Gm7729-201ENSMUST00000050143 801 ntBASIC16.54■□□□□ 0.24
Six4Q61321 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Six4Q61321 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Six4Q61321 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Six4Q61321 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Six4Q61321 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Six4Q61321 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Six4Q61321 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.53■□□□□ 0.24
Six4Q61321 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Six4Q61321 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms