Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf4bQ61136 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf4bQ61136 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.83■□□□□ 0.6
Prpf4bQ61136 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf4bQ61136 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Gm10231-201ENSMUST00000181584 441 ntBASIC18.82■□□□□ 0.6
Prpf4bQ61136 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Gm10175-202ENSMUST00000208752 441 ntBASIC18.82■□□□□ 0.6
Prpf4bQ61136 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf4bQ61136 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.81■□□□□ 0.6
Prpf4bQ61136 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf4bQ61136 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.8■□□□□ 0.6
Prpf4bQ61136 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf4bQ61136 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Gm2274-201ENSMUST00000184539 609 ntBASIC18.79■□□□□ 0.6
Prpf4bQ61136 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Gm18959-201ENSMUST00000208954 655 ntBASIC18.79■□□□□ 0.6
Prpf4bQ61136 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Prpf4bQ61136 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.78■□□□□ 0.6
Prpf4bQ61136 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.78■□□□□ 0.6
Prpf4bQ61136 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf4bQ61136 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms