Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7-2Q5R1I3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Gm27463-201ENSMUST00000183569 57 ntBASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7-2Q5R1I3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7-2Q5R1I3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms