Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav3-3Q5R1C3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav3-3Q5R1C3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms