Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rc3h1Q4VGL6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Rc3h1Q4VGL6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Gm28659-201ENSMUST00000188013 759 ntBASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Mzt1-203ENSMUST00000227948 952 ntBASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Rc3h1Q4VGL6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rc3h1Q4VGL6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rc3h1Q4VGL6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Mir8098-201ENSMUST00000184011 137 ntBASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rc3h1Q4VGL6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms