Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
R3hdm4Q4VBF2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Gm10052-201ENSMUST00000168019 960 ntBASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Gm7729-201ENSMUST00000050143 801 ntBASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.69■□□□□ 0.42
R3hdm4Q4VBF2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Gm21362-201ENSMUST00000194272 928 ntBASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
R3hdm4Q4VBF2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Gm44430-201ENSMUST00000203376 995 ntBASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
R3hdm4Q4VBF2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Gm14859-201ENSMUST00000117752 357 ntBASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
R3hdm4Q4VBF2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms