Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smcr8Q3UMB5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smcr8Q3UMB5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smcr8Q3UMB5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Gm43347-201ENSMUST00000200226 580 ntBASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smcr8Q3UMB5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Gm10052-201ENSMUST00000168019 960 ntBASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Gm7729-201ENSMUST00000050143 801 ntBASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smcr8Q3UMB5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smcr8Q3UMB5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smcr8Q3UMB5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smcr8Q3UMB5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smcr8Q3UMB5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smcr8Q3UMB5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
Smcr8Q3UMB5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smcr8Q3UMB5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smcr8Q3UMB5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms