Protein–RNA interactions for Protein: Q3TYV2

Hhla1, HERV-H LTR-associating protein 1 homolog, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hhla1Q3TYV2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hhla1Q3TYV2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hhla1Q3TYV2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hhla1Q3TYV2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hhla1Q3TYV2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Gm14494-201ENSMUST00000118786 435 ntBASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Gm6736-201ENSMUST00000166583 948 ntBASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.46■□□□□ 0.39
Hhla1Q3TYV2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hhla1Q3TYV2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Gm9727-201ENSMUST00000161387 555 ntBASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Gm2756-201ENSMUST00000195851 400 ntBASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Hhla1Q3TYV2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Gm43575-201ENSMUST00000196420 516 ntBASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hhla1Q3TYV2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Gm7222-201ENSMUST00000117512 906 ntBASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hhla1Q3TYV2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hhla1Q3TYV2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hhla1Q3TYV2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms